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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826851.1_cds_XP_016502839.1_16437
CDS Infomation

[gene=LOC107820979] [db_xref=GeneID:107820979] [protein=vicianin hydrolase-like isoform X1] [protein_id=XP_016502839.1] [location=join(25559..25729,26404..26473,39743..39801,39885..39960,40099..40176,40266..40353,41465..41717,42275..42390,43572..43789,43936..43967,44069..44171,44340..44448,44538..44715)] [gbkey=CDS]
Sequence

ATGGCTATCAGAAGAATCCTGATGAGCTTCTGCTTCTTCTACCTTGTACTGATTCTTAAT
CTTTTTGCTCTTACCAATGCTACAGTCCCGGCAAAGCGATTCGCTTCTCCTTTTAACAGG
ACAAGTTTCCCTTCTGATTTCGTATTTGGTGCTGCTTCAGCTGCTTACCAGATTGAAGGA
GGAGCTCGTCAAGGAGGTAGGAGACCTAGTATATGGGATACTTTCACGCACAAGCACCCA
GAAAAAATATTTGACCGTTCTACCGGAGATGTCGCTGTTGATTTCTATCACCGTTACAAG
GAAGATATACGTCTACTTAAGGAAGTTGGTATGAAAGCATTCAGGTTATCCATCTCTTGG
TCTCGCATTTTACCATATGGGAAAGTAAGCAAAGGAGTGAATCCAGAAGGCATAAAATTC
TACAACAATGTCATCAATGAGCTTATCTCCAATGGTTTGACGCCATTTATAACGCTTTTC
CACTGGGACACACCACAAACCCTTGAGGACGAATATGGAGGGTTTCTCAGTTCCAAAATA
GCGAAAGACTTTGGTGATTATGCAGACATTTGCTTCAAAGAATTTGGTGATAGGGTAAAG
CACTGGATCACATTGAATGAGCCATTATCTTATAGCATGTTCGGATATGCAAGAGGTACC
TTTGCACCAGGAAGATGTTCGAGTTATGTTGGTAACTGTACGGAGGGTGATTCTGCCACT
GAGCCATATATTGTTGCTCATAACTTGCTTCTTGCCCATGCAACTGGTGTCAAAGTATAT
AAAGAAAAATATCAGAAAACTCAGAAAGGACAGATAGGAGTCACTCTGGTGACTCACTGG
TTCGTGCCTAAAACCAAGACACCTCAGGGACGCAAGGCCCATTTAAAAGCTCTTGATTTT
TTCCTAGGATGGTTTTTGGATCCAATTACATATGGTGACTACCCAGCCAGCATGCGAGCT
AATGTAGGGCGTCGGCTCCCGAAATTCACATTGGAGCAGTCAAAGTTAGTGAAAGGATCG
ATCGATTTCCTAGGAATGAATTACTATACTACTTACTATGCATCTCCAATGCTATCTGTC
CCTAGAGTTAATCTTAGCTACACCACAGACAATCATGTAGATATGGCTGCTGAAAAGGAC
GGAAAACCTATCGGTACACCGACTGCCTTGAATTGGCTTTACATTTATCCAAGAGGAATA
TATGATCTCATGCTTTACATCAAGCAAAAGTACAAGAATCCTCCCATTTACATCACTGAA
AATGGAATGGCAGATGCCAACAATAGTACATTGCCACTTAAACAAGCCCTTAAGGATGAT
TTGAGGATAAGGTATTACGAGGGGCACCTATGGTTTCTGTCAAAAGCCATAAAGGCGGGG
GCAAATGTGAAAGGACATTTTGCATGGTCATTCTTAGATGACTATGAATGGGATGCTGGT
TTCACTGTCCGATTTGGCATCACTTTTGTTGACTACAAAAATGGACTTAAAAGATACCTC
AAGAAATCTGCTTATTGGTACAACAAGTTCCTCTTGAATACTGGCAAATAA

Peptide Sequence

PEP ID

XP_016502839.1
PEP Infomation

PREDICTED: vicianin hydrolase-like isoform X1 [Nicotiana tabacum]
Sequence

MAIRRILMSFCFFYLVLILNLFALTNATVPAKRFASPFNRTSFPSDFVFGAASAAYQIEG
GARQGGRRPSIWDTFTHKHPEKIFDRSTGDVAVDFYHRYKEDIRLLKEVGMKAFRLSISW
SRILPYGKVSKGVNPEGIKFYNNVINELISNGLTPFITLFHWDTPQTLEDEYGGFLSSKI
AKDFGDYADICFKEFGDRVKHWITLNEPLSYSMFGYARGTFAPGRCSSYVGNCTEGDSAT
EPYIVAHNLLLAHATGVKVYKEKYQKTQKGQIGVTLVTHWFVPKTKTPQGRKAHLKALDF
FLGWFLDPITYGDYPASMRANVGRRLPKFTLEQSKLVKGSIDFLGMNYYTTYYASPMLSV
PRVNLSYTTDNHVDMAAEKDGKPIGTPTALNWLYIYPRGIYDLMLYIKQKYKNPPIYITE
NGMADANNSTLPLKQALKDDLRIRYYEGHLWFLSKAIKAGANVKGHFAWSFLDDYEWDAG
FTVRFGITFVDYKNGLKRYLKKSAYWYNKFLLNTGK

Transcript Sequence

Gene sequence data has not been registered.